Part of it stems from that whole "whoa, how did x civilization do such amazing feats with stone picks?" concept. Maybe they had space lasers! Or that an advanced race of beings stopped in for a Starbucks three thousand years before they opened, and got discouraged and left before the cute barista that they have a secret crush on came to open the door.
Another part of it is "Oooooh, hey, guys, look at this amazing plot device I just found! It solve all our problems with physics and chemistry simultaneously, despite being written in a language we have no basis for translating, and integrates perfectly into our existing software! Who knew a hyper advanced race of people would use Notepad?". It saves time, and it kind of fun to give them a "here's the enemy that wiped us (or tried to) from existence, kthxbai, btw, it'll wake up and come hunt you, but help yourself to the fridge." story, because suddenly it gives humans an unambiguous conflict that must be attended to, and, with the combined powers of dead dudes and complaining physicists, overcome.
Another part of it is "Oooooh, hey, guys, look at this amazing plot device I just found! It solve all our problems with physics and chemistry simultaneously, despite being written in a language we have no basis for translating, and integrates perfectly into our existing software! Who knew a hyper advanced race of people would use Notepad?". It saves time, and it kind of fun to give them a "here's the enemy that wiped us (or tried to) from existence, kthxbai, btw, it'll wake up and come hunt you, but help yourself to the fridge." story, because suddenly it gives humans an unambiguous conflict that must be attended to, and, with the combined powers of dead dudes and complaining physicists, overcome.