I learned of the IT thanks to this thread, and I have to say I'm in the middle ground, with tendency to agree with the theory. Thing is, all this seems like too much to be coincidental. What's more, they also went and sold the "Final Hours of ME" application, which does say indoctrination was how they were going about it. The "losing control of Shepard's body mechanic" didn't work for them, as well as time constraints with EA, so they scrapped it. Thus the remainder of the ending, is neither here nor there, and isn't clear about what the hell happened finally.
I have to say, I disagree, at least partially with the part of the theory which states Shepard has been under Reaper influence from the start of the third game (certain variations say that indoctrination begun even earlier). The Reaper IFF is a device with a specific purpose, it can't be able to indoctrinate on its own. I can't imagine more Reaper tech was installed along with it, so I refuse to accept indoctrination before the third game.
Even in the third game, indoctrination is only really attempted (in my opinion anyway) in the post-Harbinger-attack sequence. Harbinger's presence is what's creating the "dream", in which Shepard sees the Anderson, TIM and Guardian. Mind you, this can't be taking place in any more than mere moments, because Harbinger certainly wouldn't be wasting any time firing more on Shepard, to ensure he's vaporized, unless he was attacked at that time, which adds a bit more time.
The rest more or less makes sense, some things don't fit, but that's mostly due to cuts, probably. Another thing I noticed, and thought I should add - when you choose destroy Guardian dissipates. When blue is chosen, kid remains all throughout Shepard disintegrating, and presumably this happens with green too. Some say kid smiles in blue, but it isn't really clear.
I have to say, I disagree, at least partially with the part of the theory which states Shepard has been under Reaper influence from the start of the third game (certain variations say that indoctrination begun even earlier). The Reaper IFF is a device with a specific purpose, it can't be able to indoctrinate on its own. I can't imagine more Reaper tech was installed along with it, so I refuse to accept indoctrination before the third game.
Even in the third game, indoctrination is only really attempted (in my opinion anyway) in the post-Harbinger-attack sequence. Harbinger's presence is what's creating the "dream", in which Shepard sees the Anderson, TIM and Guardian. Mind you, this can't be taking place in any more than mere moments, because Harbinger certainly wouldn't be wasting any time firing more on Shepard, to ensure he's vaporized, unless he was attacked at that time, which adds a bit more time.
The rest more or less makes sense, some things don't fit, but that's mostly due to cuts, probably. Another thing I noticed, and thought I should add - when you choose destroy Guardian dissipates. When blue is chosen, kid remains all throughout Shepard disintegrating, and presumably this happens with green too. Some say kid smiles in blue, but it isn't really clear.