They're cheaper in the sense that they are cheaper to fix/replace should anything go wrong; there's no complex set of fluid passages and nesting doll of gears and holding bands, it's basically just a set of gears. Plus what
@Fieldy409 said above, it's just nice to know that you can drive anything should you need to (it should be noted that most of the fun performance vehicles have manual transmissions, this these days a lot of them have done away with the clutch and moved to the flappy paddles on the steering wheel). As someone who learned how to drive a manual only about two years ago, it's not necessary but it doesn't hurt to know either.
Car sex obviously. For a more "real" answer, probably with automated factories, but then the whole world of Cars is a mess and doesn't make sense (they seem to follow our history, but cars have only been around for less than 150 years, were steam locomotives sentient, why are they designed to hold people that don't exist, etc).